Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HOXA2O43364 KRT18P64-201ENST00000434946 1219 ntBASIC17.05■□□□□ 0.32
HOXA2O43364 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 CTBP2P5-201ENST00000454986 1264 ntBASIC17.05■□□□□ 0.32
HOXA2O43364 KRT18P43-201ENST00000469825 1281 ntBASIC17.05■□□□□ 0.32
HOXA2O43364 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXA2O43364 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXA2O43364 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 PDIA3P1-201ENST00000471856 1510 ntBASIC17.05■□□□□ 0.32
HOXA2O43364 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXA2O43364 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
HOXA2O43364 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HOXA2O43364 ANKRD19P-201ENST00000338192 862 ntBASIC17.04■□□□□ 0.32
HOXA2O43364 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 AC022494.1-201ENST00000466044 728 ntBASIC17.04■□□□□ 0.32
HOXA2O43364 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 AC000095.1-201ENST00000603208 874 ntBASIC17.04■□□□□ 0.32
HOXA2O43364 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
HOXA2O43364 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA2O43364 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXA2O43364 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA2O43364 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXA2O43364 VDAC1P7-201ENST00000462417 847 ntBASIC17.03■□□□□ 0.32
HOXA2O43364 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXA2O43364 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXA2O43364 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXA2O43364 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXA2O43364 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXA2O43364 AP001063.1-201ENST00000568332 529 ntBASIC17.03■□□□□ 0.32
HOXA2O43364 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms