Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 AL354989.2-201ENST00000435838 1540 ntBASIC16.5■□□□□ 0.23
TRANK1O15050 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.49■□□□□ 0.23
TRANK1O15050 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 AC079178.1-201ENST00000420915 656 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 CEP164P1-201ENST00000455142 418 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.49■□□□□ 0.23
TRANK1O15050 IQSEC3P1-201ENST00000538799 536 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 RN7SL713P-201ENST00000582127 302 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.49■□□□□ 0.23
TRANK1O15050 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 AC004899.1-201ENST00000424687 1714 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.49■□□□□ 0.23
TRANK1O15050 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.49■□□□□ 0.23
TRANK1O15050 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.49■□□□□ 0.23
TRANK1O15050 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.49■□□□□ 0.23
TRANK1O15050 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 PPY2P-201ENST00000582808 702 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.49■□□□□ 0.23
TRANK1O15050 CU633904.3-201ENST00000624042 1029 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.49■□□□□ 0.23
TRANK1O15050 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.49■□□□□ 0.23
TRANK1O15050 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRANK1O15050 AC148477.4-201ENST00000613430 1793 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRANK1O15050 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 AL133267.1-201ENST00000398220 340 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 AC114501.1-201ENST00000445949 172 ntBASIC16.49■□□□□ 0.23
TRANK1O15050 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.49■□□□□ 0.23
TRANK1O15050 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRANK1O15050 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRANK1O15050 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRANK1O15050 AC006480.2-201ENST00000609770 1337 ntBASIC16.48■□□□□ 0.23
TRANK1O15050 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.48■□□□□ 0.23
TRANK1O15050 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.48■□□□□ 0.23
TRANK1O15050 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.48■□□□□ 0.23
TRANK1O15050 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.48■□□□□ 0.23
TRANK1O15050 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.48■□□□□ 0.23
TRANK1O15050 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 AL645608.8-201ENST00000606034 2086 ntBASIC16.48■□□□□ 0.23
TRANK1O15050 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.48■□□□□ 0.23
TRANK1O15050 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRANK1O15050 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.48■□□□□ 0.23
TRANK1O15050 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.48■□□□□ 0.23
TRANK1O15050 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.48■□□□□ 0.23
TRANK1O15050 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.48■□□□□ 0.23
TRANK1O15050 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRANK1O15050 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.48■□□□□ 0.23
TRANK1O15050 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.48■□□□□ 0.23
TRANK1O15050 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.47■□□□□ 0.23
TRANK1O15050 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRANK1O15050 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRANK1O15050 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRANK1O15050 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRANK1O15050 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRANK1O15050 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.47■□□□□ 0.23
TRANK1O15050 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms