Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 BX842568.4-201ENST00000421222 227 ntBASIC17.19■□□□□ 0.34
FOXN3O00409 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXN3O00409 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXN3O00409 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXN3O00409 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 MIR3687-2-201ENST00000577708 61 ntBASIC17.19■□□□□ 0.34
FOXN3O00409 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 MIR3687-1-201ENST00000614492 61 ntBASIC17.19■□□□□ 0.34
FOXN3O00409 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 AC126177.1-201ENST00000547829 2218 ntBASIC17.19■□□□□ 0.34
FOXN3O00409 AC013268.4-201ENST00000637413 2228 ntBASIC17.19■□□□□ 0.34
FOXN3O00409 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
FOXN3O00409 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 AL627223.1-201ENST00000416693 442 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 AL139010.1-201ENST00000454878 894 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.18■□□□□ 0.34
FOXN3O00409 ALG1L8P-201ENST00000533887 760 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 AC055717.3-201ENST00000622967 595 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 AC092127.1-201ENST00000567093 3455 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 CYP4F24P-201ENST00000586049 1580 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXN3O00409 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 AC136621.1-201ENST00000624017 2304 ntBASIC17.18■□□□□ 0.34
FOXN3O00409 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXN3O00409 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXN3O00409 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXN3O00409 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 SSR4P1-203ENST00000599569 2260 ntBASIC17.17■□□□□ 0.34
FOXN3O00409 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXN3O00409 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 GPS2P2-201ENST00000430745 888 ntBASIC17.17■□□□□ 0.34
FOXN3O00409 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXN3O00409 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXN3O00409 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.17■□□□□ 0.34
FOXN3O00409 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXN3O00409 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXN3O00409 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.17■□□□□ 0.34
FOXN3O00409 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXN3O00409 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms