Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CDC7O00311 AC018892.3-201ENST00000623986 2499 ntBASIC15.78■□□□□ 0.12
CDC7O00311 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 AL691432.1-201ENST00000596308 1422 ntBASIC15.78■□□□□ 0.12
CDC7O00311 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDC7O00311 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 AC144831.1-201ENST00000573312 2656 ntBASIC15.78■□□□□ 0.12
CDC7O00311 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 FAM220BP-201ENST00000377689 816 ntBASIC15.78■□□□□ 0.12
CDC7O00311 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.78■□□□□ 0.12
CDC7O00311 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.78■□□□□ 0.12
CDC7O00311 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.78■□□□□ 0.12
CDC7O00311 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 AC069335.1-201ENST00000489972 472 ntBASIC15.78■□□□□ 0.12
CDC7O00311 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC7O00311 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.78■□□□□ 0.12
CDC7O00311 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CDC7O00311 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC7O00311 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC7O00311 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.78■□□□□ 0.12
CDC7O00311 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.78■□□□□ 0.12
CDC7O00311 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.78■□□□□ 0.12
CDC7O00311 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 BNIP3P1-202ENST00000550043 1585 ntBASIC15.78■□□□□ 0.12
CDC7O00311 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC7O00311 UXT-AS1-201ENST00000590504 1525 ntBASIC15.78■□□□□ 0.12
CDC7O00311 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDC7O00311 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDC7O00311 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDC7O00311 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC7O00311 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDC7O00311 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CDC7O00311 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC7O00311 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.77■□□□□ 0.12
CDC7O00311 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC7O00311 AL592309.1-201ENST00000443127 649 ntBASIC15.77■□□□□ 0.12
CDC7O00311 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.77■□□□□ 0.12
CDC7O00311 SLC25A39P2-201ENST00000537614 270 ntBASIC15.77■□□□□ 0.12
CDC7O00311 KRT8P23-201ENST00000560090 1207 ntBASIC15.77■□□□□ 0.12
CDC7O00311 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC7O00311 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC7O00311 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC7O00311 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.77■□□□□ 0.11
CDC7O00311 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.77■□□□□ 0.11
CDC7O00311 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC7O00311 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CDC7O00311 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC7O00311 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC7O00311 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC7O00311 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC7O00311 AL136982.4-201ENST00000437689 1740 ntBASIC15.77■□□□□ 0.11
CDC7O00311 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC7O00311 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC7O00311 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 AC013268.4-201ENST00000637413 2228 ntBASIC15.76■□□□□ 0.11
CDC7O00311 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms