Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC004987.2-201ENST00000395959 1148 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 AZGP1P1-201ENST00000411909 902 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 GNAQP1-201ENST00000444815 1067 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 AC004233.3-201ENST00000607794 1269 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 AC004790.1-201ENST00000612686 536 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 AC009118.2-201ENST00000613275 655 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.05■□□□□ 0.48
DDX39AO00148 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.05■□□□□ 0.48
DDX39AO00148 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX39AO00148 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX39AO00148 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX39AO00148 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
DDX39AO00148 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
DDX39AO00148 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
DDX39AO00148 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 HIST3H2BA-201ENST00000436555 524 ntBASIC18.04■□□□□ 0.48
DDX39AO00148 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX39AO00148 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
DDX39AO00148 AL118508.1-201ENST00000613502 2345 ntBASIC18.04■□□□□ 0.48
DDX39AO00148 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.04■□□□□ 0.48
DDX39AO00148 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX39AO00148 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX39AO00148 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DDX39AO00148 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX39AO00148 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX39AO00148 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
DDX39AO00148 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
DDX39AO00148 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 COX20P2-201ENST00000452636 358 ntBASIC18.03■□□□□ 0.48
DDX39AO00148 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX39AO00148 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX39AO00148 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX39AO00148 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 KRT8P37-201ENST00000451609 1420 ntBASIC18.03■□□□□ 0.48
DDX39AO00148 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX39AO00148 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.03■□□□□ 0.48
DDX39AO00148 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX39AO00148 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX39AO00148 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.03■□□□□ 0.48
DDX39AO00148 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms