Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 AP005117.1-202ENST00000581724 1908 ntBASIC23.4■■□□□ 1.34
HFM1A2PYH4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 HLA-V-201ENST00000429037 534 ntBASIC23.4■■□□□ 1.34
HFM1A2PYH4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
HFM1A2PYH4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23.4■■□□□ 1.34
HFM1A2PYH4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC23.39■■□□□ 1.34
HFM1A2PYH4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
HFM1A2PYH4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC23.39■■□□□ 1.34
HFM1A2PYH4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
HFM1A2PYH4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HFM1A2PYH4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
HFM1A2PYH4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HFM1A2PYH4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 VDAC1P7-201ENST00000462417 847 ntBASIC23.39■■□□□ 1.33
HFM1A2PYH4 AC026410.3-201ENST00000514280 936 ntBASIC23.39■■□□□ 1.33
HFM1A2PYH4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HFM1A2PYH4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
HFM1A2PYH4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC23.39■■□□□ 1.33
HFM1A2PYH4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
HFM1A2PYH4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HFM1A2PYH4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HFM1A2PYH4 ILF3-AS1-201ENST00000591501 1983 ntBASIC23.38■■□□□ 1.33
HFM1A2PYH4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
HFM1A2PYH4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HFM1A2PYH4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HFM1A2PYH4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HFM1A2PYH4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HFM1A2PYH4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 AC132938.2-201ENST00000579188 680 ntBASIC23.38■■□□□ 1.33
HFM1A2PYH4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 AL591163.1-201ENST00000641757 987 ntBASIC23.38■■□□□ 1.33
HFM1A2PYH4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC23.38■■□□□ 1.33
HFM1A2PYH4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 GIMAP3P-201ENST00000495150 836 ntBASIC23.37■■□□□ 1.33
HFM1A2PYH4 USP32P1-208ENST00000506594 1164 ntBASIC23.37■■□□□ 1.33
HFM1A2PYH4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 AC107373.2-201ENST00000607735 490 ntBASIC23.37■■□□□ 1.33
HFM1A2PYH4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 PCDHA1-201ENST00000378133 2726 ntBASIC23.37■■□□□ 1.33
HFM1A2PYH4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.37■■□□□ 1.33
HFM1A2PYH4 AC022188.1-201ENST00000620960 1664 ntBASIC23.37■■□□□ 1.33
HFM1A2PYH4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms