Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPDC1A2A3K4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 AC097493.3-201ENST00000509725 367 ntBASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 AL158211.3-201ENST00000607385 239 ntBASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPDC1A2A3K4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPDC1A2A3K4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTPDC1A2A3K4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTPDC1A2A3K4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTPDC1A2A3K4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPDC1A2A3K4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 AP003680.1-201ENST00000598970 3660 ntBASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPDC1A2A3K4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 SPTSSB-204ENST00000617024 1292 ntBASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPDC1A2A3K4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms