Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PMS2P4-201ENST00000412466 1052 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AC093724.1-201ENST00000448659 1027 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 IGHV3-65-201ENST00000523210 341 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AL365330.1-201ENST00000607459 531 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AL121772.3-201ENST00000610840 674 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AL358472.4-201ENST00000633140 710 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AC090616.6-203ENST00000579186 1945 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 KRT18P31-201ENST00000506277 1292 ntBASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 REXO1L6P-202ENST00000619970 1078 ntBASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.23□□□□□ -0.61
UBE2D4Q9Y2X8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms