Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 PRAL-201ENST00000624952 3286 ntBASIC11.84□□□□□ -0.51
HHLA3Q9XRX5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
HHLA3Q9XRX5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.83□□□□□ -0.51
HHLA3Q9XRX5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
HHLA3Q9XRX5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
HHLA3Q9XRX5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
HHLA3Q9XRX5 AC112504.1-201ENST00000623415 1841 ntBASIC11.83□□□□□ -0.51
HHLA3Q9XRX5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 GGT4P-201ENST00000623672 1708 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SSR4P1-203ENST00000599569 2260 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 AC026396.1-201ENST00000419388 421 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PMS2P1-201ENST00000431037 1228 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 AL513480.1-201ENST00000451731 511 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 MIR4492-201ENST00000581627 80 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 Z83851.2-201ENST00000609564 659 ntBASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HHLA3Q9XRX5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 ZNF259P1-201ENST00000407656 1365 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms