Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AC068880.1-201ENST00000507289 2297 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 POU5F1P6-201ENST00000466990 990 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AP001258.2-201ENST00000529891 490 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AC023310.1-201ENST00000554836 735 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 RHOQP1-201ENST00000555758 579 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 LARP4-220ENST00000615080 856 ntTSL 5 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AC006213.4-201ENST00000616184 634 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 AC106820.2-201ENST00000563775 3264 ntBASIC22.88■■□□□ 1.25
STAG3Q9UJ98 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
STAG3Q9UJ98 ZBTB45P2-201ENST00000452245 1531 ntBASIC22.87■■□□□ 1.25
STAG3Q9UJ98 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 MTATP6P19-201ENST00000413797 659 ntBASIC22.87■■□□□ 1.25
STAG3Q9UJ98 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC22.87■■□□□ 1.25
STAG3Q9UJ98 AL592424.1-201ENST00000563624 1536 ntBASIC22.87■■□□□ 1.25
STAG3Q9UJ98 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 SLC25A24P2-201ENST00000415059 510 ntBASIC22.86■■□□□ 1.25
STAG3Q9UJ98 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 FAM86HP-204ENST00000513466 959 ntBASIC22.86■■□□□ 1.25
STAG3Q9UJ98 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 PCDHB18P-201ENST00000524813 2368 ntBASIC22.86■■□□□ 1.25
STAG3Q9UJ98 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
STAG3Q9UJ98 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 REXO1L8P-201ENST00000604378 1897 ntBASIC22.85■■□□□ 1.25
STAG3Q9UJ98 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 ELK2AP-201ENST00000392510 1007 ntBASIC22.85■■□□□ 1.25
STAG3Q9UJ98 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC22.85■■□□□ 1.25
STAG3Q9UJ98 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms