Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 AC007969.1-201ENST00000433675 447 ntBASIC20.25■□□□□ 0.83
SCN11AQ9UI33 ACTBP11-201ENST00000436287 1126 ntBASIC20.25■□□□□ 0.83
SCN11AQ9UI33 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 FAM86HP-204ENST00000513466 959 ntBASIC20.25■□□□□ 0.83
SCN11AQ9UI33 FAM8A2P-201ENST00000528813 1142 ntBASIC20.25■□□□□ 0.83
SCN11AQ9UI33 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 AL138709.1-201ENST00000614840 1693 ntBASIC20.25■□□□□ 0.83
SCN11AQ9UI33 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN11AQ9UI33 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 AC092364.2-201ENST00000596710 2692 ntBASIC20.24■□□□□ 0.83
SCN11AQ9UI33 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 BCYRN1-201ENST00000418539 200 ntBASIC20.24■□□□□ 0.83
SCN11AQ9UI33 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 AC007551.1-201ENST00000457394 519 ntBASIC20.24■□□□□ 0.83
SCN11AQ9UI33 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 MIR6869-201ENST00000619434 62 ntBASIC20.24■□□□□ 0.83
SCN11AQ9UI33 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN11AQ9UI33 KRT8P44-201ENST00000441609 1350 ntBASIC20.24■□□□□ 0.83
SCN11AQ9UI33 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 RPL13AP20-201ENST00000459725 609 ntBASIC20.23■□□□□ 0.83
SCN11AQ9UI33 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AC078819.1-201ENST00000547454 765 ntBASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AC012085.1-201ENST00000548270 765 ntBASIC20.23■□□□□ 0.83
SCN11AQ9UI33 C2orf69P2-201ENST00000562032 1123 ntBASIC20.23■□□□□ 0.83
SCN11AQ9UI33 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AC010328.2-201ENST00000597698 1111 ntBASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 AL645728.2-202ENST00000641679 227 ntBASIC20.23■□□□□ 0.83
SCN11AQ9UI33 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SCN11AQ9UI33 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 YBX1P6-201ENST00000442962 1002 ntBASIC20.22■□□□□ 0.83
SCN11AQ9UI33 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 RN7SL219P-201ENST00000582872 296 ntBASIC20.22■□□□□ 0.83
SCN11AQ9UI33 AC243960.2-201ENST00000600996 747 ntBASIC20.22■□□□□ 0.83
SCN11AQ9UI33 MIR6787-201ENST00000616675 61 ntBASIC20.22■□□□□ 0.83
SCN11AQ9UI33 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCN11AQ9UI33 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms