Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 AC074338.1-201ENST00000416825 156 ntBASIC17.22■□□□□ 0.35
CNTN3Q9P232 AL353779.1-201ENST00000434793 351 ntBASIC17.22■□□□□ 0.35
CNTN3Q9P232 PHKG1P2-201ENST00000457537 863 ntBASIC17.22■□□□□ 0.35
CNTN3Q9P232 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 PCDHA1-201ENST00000378133 2726 ntBASIC17.22■□□□□ 0.35
CNTN3Q9P232 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTN3Q9P232 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTN3Q9P232 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AC011477.6-201ENST00000604980 1927 ntBASIC17.21■□□□□ 0.35
CNTN3Q9P232 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AL391825.1-201ENST00000457671 1364 ntBASIC17.21■□□□□ 0.35
CNTN3Q9P232 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 RPL13P2-201ENST00000440687 659 ntBASIC17.21■□□□□ 0.35
CNTN3Q9P232 TARDBPP1-201ENST00000442013 1203 ntBASIC17.21■□□□□ 0.35
CNTN3Q9P232 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 AL450472.2-201ENST00000603663 1156 ntBASIC17.21■□□□□ 0.35
CNTN3Q9P232 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.21■□□□□ 0.35
CNTN3Q9P232 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTN3Q9P232 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTN3Q9P232 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNTN3Q9P232 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.21■□□□□ 0.34
CNTN3Q9P232 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNTN3Q9P232 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNTN3Q9P232 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNTN3Q9P232 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNTN3Q9P232 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 AC136604.1-201ENST00000418535 575 ntBASIC17.2■□□□□ 0.34
CNTN3Q9P232 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTN3Q9P232 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CNTN3Q9P232 HNRNPUP1-201ENST00000554987 333 ntBASIC17.2■□□□□ 0.34
CNTN3Q9P232 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms