Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 HCG4B-203ENST00000450128 991 ntBASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 MIR4751-201ENST00000578027 74 ntBASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 PRSS29P-201ENST00000440800 595 ntBASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 DNAJB3-202ENST00000449667 1266 ntBASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 ACTL9-202ENST00000612068 1252 ntBASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 AC010654.1-201ENST00000615722 808 ntBASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 SLC22A20-204ENST00000530038 1673 ntBASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALCOCO1Q9P1Z2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 AC211486.1-202ENST00000416371 468 ntBASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 VN2R19P-201ENST00000442399 1052 ntBASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 AC211476.1-201ENST00000503899 468 ntBASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
CALCOCO1Q9P1Z2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms