Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.33■□□□□ 0.2
HACD3Q9P035 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.33■□□□□ 0.2
HACD3Q9P035 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.33■□□□□ 0.2
HACD3Q9P035 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HACD3Q9P035 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
HACD3Q9P035 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HACD3Q9P035 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.32■□□□□ 0.2
HACD3Q9P035 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HACD3Q9P035 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HACD3Q9P035 AC067930.6-201ENST00000623257 4947 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HACD3Q9P035 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HACD3Q9P035 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.32■□□□□ 0.2
HACD3Q9P035 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.32■□□□□ 0.2
HACD3Q9P035 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 MIR1233-2-201ENST00000408138 82 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 MIR1233-1-201ENST00000408722 82 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 AL627223.1-201ENST00000416693 442 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HACD3Q9P035 SLC25A39P2-201ENST00000537614 270 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.32■□□□□ 0.2
HACD3Q9P035 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.32■□□□□ 0.2
HACD3Q9P035 AC104640.1-201ENST00000562617 2109 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.32■□□□□ 0.2
HACD3Q9P035 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.32■□□□□ 0.2
HACD3Q9P035 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.32■□□□□ 0.2
HACD3Q9P035 AC079781.4-201ENST00000641908 219 ntBASIC16.32■□□□□ 0.2
HACD3Q9P035 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HACD3Q9P035 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.32■□□□□ 0.2
HACD3Q9P035 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.31■□□□□ 0.2
HACD3Q9P035 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.31■□□□□ 0.2
HACD3Q9P035 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HACD3Q9P035 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HACD3Q9P035 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.31■□□□□ 0.2
HACD3Q9P035 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 RNA5SP410-201ENST00000516285 106 ntBASIC16.31■□□□□ 0.2
HACD3Q9P035 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.31■□□□□ 0.2
HACD3Q9P035 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.31■□□□□ 0.2
HACD3Q9P035 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.31■□□□□ 0.2
HACD3Q9P035 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.31■□□□□ 0.2
HACD3Q9P035 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
HACD3Q9P035 AC061975.2-201ENST00000581722 295 ntBASIC16.31■□□□□ 0.2
HACD3Q9P035 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 AC134684.3-201ENST00000641758 218 ntBASIC16.31■□□□□ 0.2
HACD3Q9P035 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.31■□□□□ 0.2
HACD3Q9P035 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HACD3Q9P035 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HACD3Q9P035 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.3■□□□□ 0.2
HACD3Q9P035 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HACD3Q9P035 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms