Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.96■□□□□ 0.3
TLR9Q9NR96 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 FAM21FP-201ENST00000426241 1131 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 CSF2RBP1-201ENST00000447905 391 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 FO681548.1-201ENST00000455617 1132 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 AC068587.3-201ENST00000526613 355 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 ENPP7P5-201ENST00000541031 1031 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 AC005915.1-201ENST00000624912 2018 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 PKD1P1-201ENST00000458669 6805 ntBASIC16.95■□□□□ 0.3
TLR9Q9NR96 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TLR9Q9NR96 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TLR9Q9NR96 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 AC018695.7-201ENST00000624587 2492 ntBASIC16.94■□□□□ 0.3
TLR9Q9NR96 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 RNF216P1-203ENST00000404404 2427 ntBASIC16.94■□□□□ 0.3
TLR9Q9NR96 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 SOCS2P1-201ENST00000417727 557 ntBASIC16.94■□□□□ 0.3
TLR9Q9NR96 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 TARDBPP1-201ENST00000442013 1203 ntBASIC16.94■□□□□ 0.3
TLR9Q9NR96 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 AC245100.5-201ENST00000452108 331 ntBASIC16.94■□□□□ 0.3
TLR9Q9NR96 RPL13AP25-201ENST00000484130 612 ntBASIC16.94■□□□□ 0.3
TLR9Q9NR96 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TLR9Q9NR96 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TLR9Q9NR96 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 INTS4P2-202ENST00000614726 2019 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms