Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AL031284.1-201ENST00000419297 478 ntBASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 AC007064.4-201ENST00000637740 555 ntBASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 AC025580.3-201ENST00000617932 1424 ntBASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 AC243562.2-201ENST00000561247 970 ntBASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 AL773604.1-201ENST00000617417 272 ntBASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 AL390755.1-201ENST00000623716 2027 ntBASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC52A3Q9NQ40 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC52A3Q9NQ40 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms