Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AC112504.1-201ENST00000623415 1841 ntBASIC18.91■□□□□ 0.62
RNF41Q9H4P4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AC004890.2-204ENST00000481968 304 ntBASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 ZNF890P-202ENST00000530367 1156 ntBASIC18.91■□□□□ 0.62
RNF41Q9H4P4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AL450472.2-201ENST00000603663 1156 ntBASIC18.91■□□□□ 0.62
RNF41Q9H4P4 AL844908.2-201ENST00000609461 460 ntBASIC18.91■□□□□ 0.62
RNF41Q9H4P4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.91■□□□□ 0.62
RNF41Q9H4P4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AZGP1P1-201ENST00000411909 902 ntBASIC18.9■□□□□ 0.62
RNF41Q9H4P4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 PHKG1P2-201ENST00000457537 863 ntBASIC18.9■□□□□ 0.62
RNF41Q9H4P4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AL512361.1-201ENST00000554200 418 ntBASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AC010336.2-201ENST00000564226 506 ntBASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AC011467.4-201ENST00000594891 528 ntBASIC18.9■□□□□ 0.62
RNF41Q9H4P4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF41Q9H4P4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF41Q9H4P4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
RNF41Q9H4P4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF41Q9H4P4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 INGX-202ENST00000489074 768 ntBASIC18.89■□□□□ 0.61
RNF41Q9H4P4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF41Q9H4P4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms