Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 NDRG2-273ENST00000557616 579 ntTSL 517.21■□□□□ 0.352e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-265ENST00000557182 559 ntTSL 417.14■□□□□ 0.332e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.332e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.312e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.77■□□□□ 0.272e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.242e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.242e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.22■□□□□ 0.192e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-232ENST00000554419 583 ntTSL 315.9■□□□□ 0.142e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-259ENST00000556924 603 ntTSL 415.79■□□□□ 0.122e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-256ENST00000556561 580 ntTSL 515.34■□□□□ 0.052e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-257ENST00000556688 583 ntTSL 515.14■□□□□ 0.012e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-223ENST00000553867 848 ntTSL 514.92□□□□□ -0.022e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-260ENST00000556974 1012 ntTSL 514.39□□□□□ -0.112e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-214ENST00000553442 639 ntTSL 514.15□□□□□ -0.142e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.232e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-249ENST00000555869 871 ntTSL 513.4□□□□□ -0.262e-6■□□□□ 9.8
XRN2Q9H0D6 AP2A2-203ENST00000524559 935 ntTSL 512.89□□□□□ -0.352e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-250ENST00000556008 1051 ntTSL 512.86□□□□□ -0.352e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-210ENST00000397856 1309 ntTSL 5 BASIC12.57□□□□□ -0.42e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-240ENST00000555026 1162 ntTSL 512.13□□□□□ -0.472e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-248ENST00000555767 560 ntTSL 412.11□□□□□ -0.472e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-255ENST00000556457 635 ntTSL 511.15□□□□□ -0.622e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-234ENST00000554483 561 ntTSL 410.81□□□□□ -0.682e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-212ENST00000403829 1500 ntTSL 2 BASIC10.71□□□□□ -0.692e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-224ENST00000553900 576 ntTSL 210.14□□□□□ -0.792e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-275ENST00000557669 657 ntTSL 210.14□□□□□ -0.792e-6■□□□□ 9.8
XRN2Q9H0D6 NDRG2-229ENST00000554379 553 ntTSL 410.01□□□□□ -0.812e-6■□□□□ 9.8
XRN2Q9H0D6 SLC3A2-222ENST00000546253 582 ntTSL 418.74■□□□□ 0.595e-15■□□□□ 9.8
XRN2Q9H0D6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.168e-8■□□□□ 9.7
XRN2Q9H0D6 RAB11FIP3-204ENST00000449879 580 ntTSL 320.1■□□□□ 0.818e-8■□□□□ 9.7
XRN2Q9H0D6 RAB11FIP3-206ENST00000452814 804 ntTSL 519.14■□□□□ 0.658e-8■□□□□ 9.7
XRN2Q9H0D6 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 512.12□□□□□ -0.478e-8■□□□□ 9.7
XRN2Q9H0D6 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC11.51□□□□□ -0.578e-8■□□□□ 9.7
XRN2Q9H0D6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.084e-6■□□□□ 9.7
XRN2Q9H0D6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.994e-6■□□□□ 9.7
XRN2Q9H0D6 EGFL8-221ENST00000432129 825 ntTSL 524.2■■□□□ 1.464e-6■□□□□ 9.7
XRN2Q9H0D6 EGFL8-222ENST00000466239 2441 ntTSL 215.47■□□□□ 0.074e-6■□□□□ 9.7
XRN2Q9H0D6 SFPQ-202ENST00000460428 464 ntTSL 28.48□□□□□ -1.052e-13■□□□□ 9.7
XRN2Q9H0D6 SFPQ-206ENST00000470472 874 ntTSL 54.45□□□□□ -1.72e-13■□□□□ 9.7
XRN2Q9H0D6 MCRIP2-204ENST00000575894 1728 nt19.51■□□□□ 0.713e-6■□□□□ 9.7
XRN2Q9H0D6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.713e-6■□□□□ 9.7
XRN2Q9H0D6 HOXB7-203ENST00000567101 528 ntTSL 213.05□□□□□ -0.323e-6■□□□□ 9.7
XRN2Q9H0D6 ZNF692-207ENST00000468455 644 ntTSL 521.38■■□□□ 1.014e-8■□□□□ 9.7
XRN2Q9H0D6 RHBG-201ENST00000451864 1927 ntTSL 222.96■■□□□ 1.275e-25■□□□□ 9.7
XRN2Q9H0D6 RHBG-208ENST00000620376 1984 ntTSL 222.91■■□□□ 1.265e-25■□□□□ 9.7
XRN2Q9H0D6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.45e-25■□□□□ 9.7
XRN2Q9H0D6 RHBG-205ENST00000612897 1862 ntTSL 1 (best)16.88■□□□□ 0.295e-25■□□□□ 9.7
XRN2Q9H0D6 RHBG-206ENST00000613460 1912 ntTSL 1 (best)15.85■□□□□ 0.135e-25■□□□□ 9.7
XRN2Q9H0D6 RHBG-207ENST00000618120 2424 ntTSL 213.39□□□□□ -0.275e-25■□□□□ 9.7
XRN2Q9H0D6 RPS8-207ENST00000485390 1115 ntTSL 1 (best)25.77■■□□□ 1.722e-7■□□□□ 9.7
XRN2Q9H0D6 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.172e-7■□□□□ 9.7
XRN2Q9H0D6 RPS8-201ENST00000372209 685 ntTSL 2 BASIC12.57□□□□□ -0.42e-7■□□□□ 9.7
XRN2Q9H0D6 EEF1B2-210ENST00000479587 701 ntTSL 217.9■□□□□ 0.464e-6■□□□□ 9.7
XRN2Q9H0D6 EEF1B2-209ENST00000460760 1025 ntTSL 213.46□□□□□ -0.254e-6■□□□□ 9.7
XRN2Q9H0D6 EEF1B2-206ENST00000435123 389 ntTSL 59.96□□□□□ -0.824e-6■□□□□ 9.7
XRN2Q9H0D6 C20orf204-201ENST00000358393 1466 ntTSL 228.48■■■□□ 2.153e-7■□□□□ 9.7
XRN2Q9H0D6 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)25.8■■□□□ 1.723e-7■□□□□ 9.7
XRN2Q9H0D6 NDUFA11-204ENST00000591341 403 ntTSL 219.37■□□□□ 0.691e-6■□□□□ 9.7
XRN2Q9H0D6 NDUFA11-206ENST00000593233 657 ntTSL 319.37■□□□□ 0.691e-6■□□□□ 9.7
XRN2Q9H0D6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.661e-6■□□□□ 9.7
XRN2Q9H0D6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.43■□□□□ 0.381e-6■□□□□ 9.7
XRN2Q9H0D6 ZNF251-204ENST00000530353 2342 ntTSL 223.51■■□□□ 1.351e-8■□□□□ 9.7
XRN2Q9H0D6 ZNF251-202ENST00000524394 315 ntTSL 518.94■□□□□ 0.621e-8■□□□□ 9.7
XRN2Q9H0D6 ZNF251-203ENST00000525191 618 ntTSL 317.55■□□□□ 0.41e-8■□□□□ 9.7
XRN2Q9H0D6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.041e-8■□□□□ 9.7
XRN2Q9H0D6 NSMF-209ENST00000482448 551 ntTSL 312.93□□□□□ -0.344e-6■□□□□ 9.7
XRN2Q9H0D6 HNRNPA2B1-206ENST00000490912 5328 ntTSL 215.15■□□□□ 0.025e-9■□□□□ 9.6
XRN2Q9H0D6 HNRNPA2B1-203ENST00000360787 1724 ntTSL 515.14■□□□□ 0.015e-9■□□□□ 9.6
XRN2Q9H0D6 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.87□□□□□ -0.195e-9■□□□□ 9.6
XRN2Q9H0D6 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.215e-9■□□□□ 9.6
XRN2Q9H0D6 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.84□□□□□ -0.675e-9■□□□□ 9.6
XRN2Q9H0D6 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.115e-9■□□□□ 9.6
XRN2Q9H0D6 ARF1-208ENST00000478336 930 ntTSL 227.93■■■□□ 2.062e-9■□□□□ 9.6
XRN2Q9H0D6 ARF1-207ENST00000477451 789 ntTSL 519.01■□□□□ 0.632e-9■□□□□ 9.6
XRN2Q9H0D6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.612e-9■□□□□ 9.6
XRN2Q9H0D6 ARF1-202ENST00000469235 678 ntTSL 318.77■□□□□ 0.62e-9■□□□□ 9.6
XRN2Q9H0D6 ARF1-210ENST00000482962 597 ntTSL 317.39■□□□□ 0.372e-9■□□□□ 9.6
XRN2Q9H0D6 ARF1-205ENST00000473546 291 ntTSL 215.74■□□□□ 0.112e-9■□□□□ 9.6
XRN2Q9H0D6 E2F4-206ENST00000565849 639 ntTSL 331.87■■■□□ 2.695e-7■□□□□ 9.6
XRN2Q9H0D6 E2F4-213ENST00000569573 849 ntTSL 331.32■■■□□ 2.65e-7■□□□□ 9.6
XRN2Q9H0D6 FAM214A-206ENST00000561543 931 ntTSL 330.02■■■□□ 2.45e-7■□□□□ 9.6
XRN2Q9H0D6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.985e-7■□□□□ 9.6
XRN2Q9H0D6 E2F4-210ENST00000568485 707 ntTSL 226.98■■□□□ 1.915e-7■□□□□ 9.6
XRN2Q9H0D6 IFNGR2-205ENST00000439213 906 ntTSL 525.16■■□□□ 1.625e-7■□□□□ 9.6
XRN2Q9H0D6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.535e-7■□□□□ 9.6
XRN2Q9H0D6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.97■■□□□ 1.435e-7■□□□□ 9.6
XRN2Q9H0D6 BCL2L2-205ENST00000557236 631 ntTSL 523.92■■□□□ 1.425e-7■□□□□ 9.6
XRN2Q9H0D6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.325e-7■□□□□ 9.6
XRN2Q9H0D6 SH2B1-215ENST00000569651 821 ntTSL 522.69■■□□□ 1.225e-12■□□□□ 9.6
XRN2Q9H0D6 IFNGR2-206ENST00000545369 966 ntTSL 522.3■■□□□ 1.165e-7■□□□□ 9.6
XRN2Q9H0D6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.24■■□□□ 1.155e-7■□□□□ 9.6
XRN2Q9H0D6 E2F4-202ENST00000561904 897 ntTSL 321.61■■□□□ 1.055e-7■□□□□ 9.6
XRN2Q9H0D6 UNK-208ENST00000592629 633 ntTSL 321.03■□□□□ 0.967e-6■□□□□ 9.6
XRN2Q9H0D6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.88■□□□□ 0.775e-7■□□□□ 9.6
XRN2Q9H0D6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.685e-7■□□□□ 9.6
XRN2Q9H0D6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.685e-7■□□□□ 9.6
XRN2Q9H0D6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.623e-6■□□□□ 9.6
XRN2Q9H0D6 ULK1-203ENST00000540568 2145 ntTSL 218.52■□□□□ 0.555e-7■□□□□ 9.6
XRN2Q9H0D6 TMEM184A-202ENST00000319010 866 ntTSL 518.36■□□□□ 0.535e-7■□□□□ 9.6
Retrieved 100 of 21,068 protein–RNA pairs in 57.7 ms