Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 AP001889.1-201ENST00000525414 633 ntBASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 AC036164.1-201ENST00000570544 333 ntBASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 AC068418.2-201ENST00000577309 3703 ntBASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2OQ9C0C9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 NUS1P3-201ENST00000423502 862 ntBASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AC244452.3-201ENST00000636814 210 ntBASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms