Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 BX284668.4-201ENST00000453917 508 ntBASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP4Q9C0A0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AC005052.1-201ENST00000625181 2492 ntBASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AC015818.8-201ENST00000587907 1519 ntBASIC19.9■□□□□ 0.78
CNTNAP4Q9C0A0 AL138799.1-201ENST00000448213 1675 ntBASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
CNTNAP4Q9C0A0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 ACTBP8-201ENST00000403258 1108 ntBASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 RN7SL190P-201ENST00000582519 257 ntBASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP4Q9C0A0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 AL096828.3-201ENST00000615354 462 ntBASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP4Q9C0A0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms