Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRIP1Q9BX63 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AC092506.1-202ENST00000401022 528 ntBASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AC136604.1-201ENST00000418535 575 ntBASIC19.69■□□□□ 0.74
BRIP1Q9BX63 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AC023310.1-201ENST00000554836 735 ntBASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 AC138932.1-201ENST00000534164 6830 ntBASIC19.69■□□□□ 0.74
BRIP1Q9BX63 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRIP1Q9BX63 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 MIR326-201ENST00000362220 95 ntBASIC19.68■□□□□ 0.74
BRIP1Q9BX63 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 AC106886.4-201ENST00000623557 2502 ntBASIC19.68■□□□□ 0.74
BRIP1Q9BX63 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRIP1Q9BX63 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 AC026410.3-201ENST00000514280 936 ntBASIC19.67■□□□□ 0.74
BRIP1Q9BX63 AP001258.2-201ENST00000529891 490 ntBASIC19.67■□□□□ 0.74
BRIP1Q9BX63 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.67■□□□□ 0.74
BRIP1Q9BX63 RHOQP1-201ENST00000555758 579 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms