Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SPDYE9P-201ENST00000570642 692 ntBASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SPDYE10P-202ENST00000612005 668 ntBASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SPDYE8P-202ENST00000612377 668 ntBASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 LINC01101-201ENST00000622953 1884 ntBASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 LINC00628-201ENST00000628516 1289 ntBASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 AL596087.1-201ENST00000400979 1969 ntBASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 PKD1P5-201ENST00000532415 10291 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 HMGA1P7-201ENST00000406908 502 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AL627223.1-201ENST00000416693 442 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 RN7SL589P-201ENST00000481268 310 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 KRT8P48-201ENST00000515599 1220 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AC109322.1-201ENST00000524499 1264 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AC009093.7-201ENST00000623853 1223 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 ALOX12P2-203ENST00000570921 1945 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 AC006486.2-201ENST00000624246 2199 ntBASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF4Q9BUZ4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms