Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AL671277.1-201ENST00000429656 993 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 RARRES2P8-201ENST00000566335 367 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AC027796.2-201ENST00000575326 344 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AL355385.1-201ENST00000606123 409 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 AL589702.1-201ENST00000641229 1509 ntBASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
YIPF4Q9BSR8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AC092902.6-201ENST00000641783 218 ntBASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
YIPF4Q9BSR8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AC067930.6-201ENST00000623257 4947 ntBASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 MCCD1P2-201ENST00000423228 335 ntBASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AL135744.1-201ENST00000565098 629 ntBASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
YIPF4Q9BSR8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms