Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AJ011931.1-201ENST00000618749 2492 ntBASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 STARP1-201ENST00000397973 869 ntBASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AL845331.1-201ENST00000424978 1190 ntBASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 GUSBP12-201ENST00000513727 720 ntBASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AC005622.1-201ENST00000636801 1703 ntBASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 AC073869.1-201ENST00000415574 2762 ntBASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 AL355075.4-201ENST00000554988 638 ntBASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 AL353801.3-201ENST00000609898 542 ntBASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 AL138966.2-201ENST00000621997 464 ntBASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC22CQ9BRL7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
SEC22CQ9BRL7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
SEC22CQ9BRL7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.64□□□□□ -0.23
SEC22CQ9BRL7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC22CQ9BRL7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC22CQ9BRL7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC22CQ9BRL7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SEC22CQ9BRL7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SEC22CQ9BRL7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms