Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
SMOQ99835 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.78■□□□□ 0.28
SMOQ99835 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.78■□□□□ 0.28
SMOQ99835 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.78■□□□□ 0.28
SMOQ99835 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.78■□□□□ 0.28
SMOQ99835 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.78■□□□□ 0.28
SMOQ99835 SRD5A3P1-201ENST00000603021 949 ntBASIC16.78■□□□□ 0.28
SMOQ99835 LINC01115-203ENST00000606068 577 ntBASIC16.78■□□□□ 0.28
SMOQ99835 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.78■□□□□ 0.28
SMOQ99835 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.78■□□□□ 0.28
SMOQ99835 AL513523.2-202ENST00000427283 2040 ntBASIC16.78■□□□□ 0.28
SMOQ99835 DOC2GP-204ENST00000639052 2548 ntBASIC16.78■□□□□ 0.28
SMOQ99835 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.78■□□□□ 0.28
SMOQ99835 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
SMOQ99835 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.77■□□□□ 0.28
SMOQ99835 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
SMOQ99835 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMOQ99835 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.77■□□□□ 0.28
SMOQ99835 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMOQ99835 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.77■□□□□ 0.28
SMOQ99835 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.77■□□□□ 0.28
SMOQ99835 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMOQ99835 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
SMOQ99835 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.77■□□□□ 0.28
SMOQ99835 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.77■□□□□ 0.28
SMOQ99835 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 AC136604.1-201ENST00000418535 575 ntBASIC16.77■□□□□ 0.28
SMOQ99835 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.77■□□□□ 0.28
SMOQ99835 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.77■□□□□ 0.28
SMOQ99835 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
SMOQ99835 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.77■□□□□ 0.28
SMOQ99835 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMOQ99835 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SMOQ99835 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SMOQ99835 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.77■□□□□ 0.27
SMOQ99835 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SMOQ99835 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.77■□□□□ 0.27
SMOQ99835 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMOQ99835 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.76■□□□□ 0.27
SMOQ99835 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.76■□□□□ 0.27
SMOQ99835 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.76■□□□□ 0.27
SMOQ99835 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMOQ99835 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMOQ99835 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.75■□□□□ 0.27
SMOQ99835 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms