Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
FGD4Q96M96 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FGD4Q96M96 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FGD4Q96M96 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FGD4Q96M96 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FGD4Q96M96 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.12■□□□□ 0.49
FGD4Q96M96 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.12■□□□□ 0.49
FGD4Q96M96 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 AC243562.2-201ENST00000561247 970 ntBASIC18.12■□□□□ 0.49
FGD4Q96M96 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.12■□□□□ 0.49
FGD4Q96M96 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 MIR6775-201ENST00000617557 69 ntBASIC18.12■□□□□ 0.49
FGD4Q96M96 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
FGD4Q96M96 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.12■□□□□ 0.49
FGD4Q96M96 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FGD4Q96M96 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.11■□□□□ 0.49
FGD4Q96M96 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FGD4Q96M96 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.11■□□□□ 0.49
FGD4Q96M96 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.11■□□□□ 0.49
FGD4Q96M96 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.11■□□□□ 0.49
FGD4Q96M96 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.11■□□□□ 0.49
FGD4Q96M96 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 ALOX12P2-203ENST00000570921 1945 ntBASIC18.11■□□□□ 0.49
FGD4Q96M96 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FGD4Q96M96 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.11■□□□□ 0.49
FGD4Q96M96 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FGD4Q96M96 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 AL391005.1-201ENST00000623953 2435 ntBASIC18.1■□□□□ 0.49
FGD4Q96M96 AC080080.1-201ENST00000625121 2420 ntBASIC18.1■□□□□ 0.49
FGD4Q96M96 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FGD4Q96M96 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.1■□□□□ 0.49
FGD4Q96M96 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.1■□□□□ 0.49
FGD4Q96M96 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.1■□□□□ 0.49
FGD4Q96M96 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.1■□□□□ 0.49
FGD4Q96M96 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.1■□□□□ 0.49
FGD4Q96M96 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.1■□□□□ 0.49
FGD4Q96M96 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.1■□□□□ 0.49
FGD4Q96M96 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FGD4Q96M96 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FGD4Q96M96 AC022211.2-201ENST00000585075 2527 ntBASIC18.1■□□□□ 0.49
FGD4Q96M96 AC106886.4-201ENST00000623557 2502 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms