Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 IGHV3-62-201ENST00000520057 340 ntBASIC17.02■□□□□ 0.32
TRIM11Q96F44 C20orf181-201ENST00000623918 480 ntBASIC17.02■□□□□ 0.32
TRIM11Q96F44 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM11Q96F44 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM11Q96F44 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM11Q96F44 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM11Q96F44 AL691432.1-201ENST00000596308 1422 ntBASIC17.02■□□□□ 0.31
TRIM11Q96F44 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM11Q96F44 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM11Q96F44 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM11Q96F44 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM11Q96F44 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM11Q96F44 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 MIR346-201ENST00000362234 95 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC004987.2-201ENST00000395959 1148 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC004832.2-201ENST00000426397 482 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 MKNK2P1-201ENST00000437526 628 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC243562.1-201ENST00000560672 389 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC104640.1-201ENST00000562617 2109 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 AP000842.3-202ENST00000569238 1080 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 AC092384.3-202ENST00000564646 2873 ntBASIC17.01■□□□□ 0.31
TRIM11Q96F44 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRIM11Q96F44 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM11Q96F44 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM11Q96F44 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM11Q96F44 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17■□□□□ 0.31
TRIM11Q96F44 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 MIR940-201ENST00000401276 94 ntBASIC17■□□□□ 0.31
TRIM11Q96F44 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM11Q96F44 RPS8P6-201ENST00000426177 609 ntBASIC17■□□□□ 0.31
TRIM11Q96F44 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17■□□□□ 0.31
TRIM11Q96F44 SPCS2P4-201ENST00000436160 681 ntBASIC17■□□□□ 0.31
TRIM11Q96F44 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17■□□□□ 0.31
TRIM11Q96F44 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17■□□□□ 0.31
TRIM11Q96F44 AC079140.1-201ENST00000508039 487 ntBASIC17■□□□□ 0.31
TRIM11Q96F44 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17■□□□□ 0.31
TRIM11Q96F44 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms