Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 AC105021.1-202ENST00000570572 669 ntBASIC15.57■□□□□ 0.08
RNF31Q96EP0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 AC012645.4-201ENST00000610691 1061 ntBASIC15.57■□□□□ 0.08
RNF31Q96EP0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 AC022144.1-201ENST00000602255 1580 ntBASIC15.57■□□□□ 0.08
RNF31Q96EP0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.57■□□□□ 0.08
RNF31Q96EP0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF31Q96EP0 AC078925.2-201ENST00000624013 1973 ntBASIC15.56■□□□□ 0.08
RNF31Q96EP0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 AC013467.2-201ENST00000605472 835 ntBASIC15.56■□□□□ 0.08
RNF31Q96EP0 RN7SL828P-201ENST00000607615 303 ntBASIC15.56■□□□□ 0.08
RNF31Q96EP0 AC004233.3-201ENST00000607794 1269 ntBASIC15.56■□□□□ 0.08
RNF31Q96EP0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 AC007950.2-201ENST00000615045 2347 ntBASIC15.56■□□□□ 0.08
RNF31Q96EP0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF31Q96EP0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF31Q96EP0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms