Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDF1Q96CC6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDF1Q96CC6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AP3S2-216ENST00000617003 1561 ntBASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 RPS8P6-201ENST00000426177 609 ntBASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 MIR4469-201ENST00000583919 79 ntBASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AL513210.1-201ENST00000629608 234 ntBASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 BNIP3P1-202ENST00000550043 1585 ntBASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDF1Q96CC6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDF1Q96CC6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.65■□□□□ 0.1
RHBDF1Q96CC6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDF1Q96CC6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RHBDF1Q96CC6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RHBDF1Q96CC6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms