Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE4Q96A23 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 MIR648-201ENST00000385046 94 ntBASIC14.47□□□□□ -0.09
CPNE4Q96A23 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 MTND6P24-201ENST00000440466 518 ntBASIC14.47□□□□□ -0.09
CPNE4Q96A23 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE4Q96A23 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CPNE4Q96A23 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CETN4P-206ENST00000642099 2168 ntBASIC14.46□□□□□ -0.09
CPNE4Q96A23 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 MIR943-201ENST00000401286 94 ntBASIC14.46□□□□□ -0.09
CPNE4Q96A23 HAUS4P1-201ENST00000406739 1145 ntBASIC14.46□□□□□ -0.09
CPNE4Q96A23 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AC243562.2-201ENST00000561247 970 ntBASIC14.46□□□□□ -0.09
CPNE4Q96A23 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 AC073592.8-201ENST00000624126 511 ntBASIC14.46□□□□□ -0.09
CPNE4Q96A23 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 PCDH8P1-201ENST00000428983 2773 ntBASIC14.46□□□□□ -0.09
CPNE4Q96A23 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE4Q96A23 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE4Q96A23 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms