Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 BRI3BPP1-201ENST00000594224 787 ntBASIC16.07■□□□□ 0.16
CHD5Q8TDI0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.07■□□□□ 0.16
CHD5Q8TDI0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.07■□□□□ 0.16
CHD5Q8TDI0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 AC093004.1-201ENST00000508850 424 ntBASIC16.07■□□□□ 0.16
CHD5Q8TDI0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 AC000095.1-201ENST00000603208 874 ntBASIC16.07■□□□□ 0.16
CHD5Q8TDI0 AC007431.3-201ENST00000623221 587 ntBASIC16.07■□□□□ 0.16
CHD5Q8TDI0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHD5Q8TDI0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 KRT18P43-201ENST00000469825 1281 ntBASIC16.06■□□□□ 0.16
CHD5Q8TDI0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 CHCHD2P3-201ENST00000603038 451 ntBASIC16.06■□□□□ 0.16
CHD5Q8TDI0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 AC025048.6-201ENST00000634326 1161 ntBASIC16.06■□□□□ 0.16
CHD5Q8TDI0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 IGHV3-72-202ENST00000621503 303 ntBASIC16.06■□□□□ 0.16
CHD5Q8TDI0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHD5Q8TDI0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.05■□□□□ 0.16
CHD5Q8TDI0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD5Q8TDI0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms