Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AC134407.2-201ENST00000625089 1978 ntBASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AP3S2-216ENST00000617003 1561 ntBASIC18.81■□□□□ 0.6
SMARCC2Q8TAQ2 AC104640.1-201ENST00000562617 2109 ntBASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 AC067863.1-201ENST00000494933 530 ntBASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 RARRES2P9-201ENST00000565168 469 ntBASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 AC093512.1-201ENST00000617969 520 ntBASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 PRAL-201ENST00000624952 3286 ntBASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCC2Q8TAQ2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 TUBB3P1-201ENST00000405796 1332 ntBASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 AC015911.4-201ENST00000588022 1070 ntBASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 AC126177.1-201ENST00000547829 2218 ntBASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCC2Q8TAQ2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms