Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 AL603832.2-201ENST00000566195 2125 ntBASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 AC067930.6-201ENST00000623257 4947 ntBASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRFBP1Q8NEF9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
SRFBP1Q8NEF9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 AL139010.1-201ENST00000454878 894 ntBASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 AC008677.1-201ENST00000519230 1561 ntBASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 TSPY26P-202ENST00000565928 3884 ntBASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 CDC14C-201ENST00000428251 1719 ntBASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 AC069224.1-201ENST00000566372 1715 ntBASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRFBP1Q8NEF9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 LINC02447-202ENST00000501888 2146 ntBASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 AC092850.2-201ENST00000623821 2697 ntBASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 SPDYE7P-202ENST00000420373 878 ntBASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 RBPMS2P1-201ENST00000437762 623 ntBASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 AC063926.3-201ENST00000624734 5658 ntBASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.38■□□□□ 0.05
SRFBP1Q8NEF9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 AC011477.6-201ENST00000604980 1927 ntBASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SRFBP1Q8NEF9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms