Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD1Q8N668 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.46□□□□□ -0.26
COMMD1Q8N668 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD1Q8N668 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.46□□□□□ -0.26
COMMD1Q8N668 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
COMMD1Q8N668 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD1Q8N668 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.46□□□□□ -0.26
COMMD1Q8N668 PCDHA3-202ENST00000532566 4594 ntBASIC13.46□□□□□ -0.26
COMMD1Q8N668 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 LINC01101-201ENST00000622953 1884 ntBASIC13.45□□□□□ -0.26
COMMD1Q8N668 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 PTCHD3P3-201ENST00000403073 906 ntBASIC13.45□□□□□ -0.26
COMMD1Q8N668 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.45□□□□□ -0.26
COMMD1Q8N668 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD1Q8N668 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD1Q8N668 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 AL590787.1-201ENST00000568856 1315 ntBASIC13.44□□□□□ -0.26
COMMD1Q8N668 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 VN2R19P-201ENST00000442399 1052 ntBASIC13.44□□□□□ -0.26
COMMD1Q8N668 AC108073.2-201ENST00000464002 357 ntBASIC13.44□□□□□ -0.26
COMMD1Q8N668 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 GGT4P-201ENST00000623672 1708 ntBASIC13.44□□□□□ -0.26
COMMD1Q8N668 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD1Q8N668 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD1Q8N668 AC097376.2-205ENST00000610159 5334 ntBASIC13.43□□□□□ -0.26
COMMD1Q8N668 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms