Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 FAM8A2P-201ENST00000528813 1142 ntBASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 MIR4525-201ENST00000580000 75 ntBASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 PCGF3-213ENST00000620529 1899 ntBASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPOQ8N3V7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 USP32P1-208ENST00000506594 1164 ntBASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 SNX29P1-201ENST00000548357 1007 ntBASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AC133539.2-201ENST00000604757 467 ntBASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 KRT8P22-201ENST00000562317 1415 ntBASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPOQ8N3V7 AC078925.2-201ENST00000624013 1973 ntBASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 FAM86MP-201ENST00000340703 885 ntBASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 AC004987.2-201ENST00000395959 1148 ntBASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 ACTG1P3-201ENST00000431775 1114 ntBASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 AL391069.4-201ENST00000609583 481 ntBASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms