Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 AC004790.1-201ENST00000612686 536 ntBASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
PHTF2Q8N3S3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SPDYE17-201ENST00000412399 783 ntBASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 API5-211ENST00000534695 560 ntTSL 5 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHTF2Q8N3S3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 BTBD7P1-201ENST00000447253 1453 ntBASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 COX5BP8-201ENST00000416911 349 ntBASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 NME2P1-201ENST00000426182 414 ntBASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 CR383656.12-201ENST00000549567 513 ntBASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.62■□□□□ 0.25
PHTF2Q8N3S3 AC027307.3-201ENST00000594262 1100 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms