Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.05■□□□□ 0.16
NUDCD3Q8IVD9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 MIR4515-201ENST00000584082 81 ntBASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 AC008667.4-201ENST00000607370 168 ntBASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 AC011477.6-201ENST00000604980 1927 ntBASIC16.04■□□□□ 0.16
NUDCD3Q8IVD9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 MYO15B-237ENST00000642007 4893 ntBASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 RNU1-129P-201ENST00000384064 167 ntBASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 U1.21-201ENST00000580816 167 ntBASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 AC091076.1-201ENST00000610741 619 ntBASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 OR2I1P-210ENST00000642037 4691 ntBASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUDCD3Q8IVD9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms