Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.88■□□□□ 0.45
TRIM50Q86XT4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 AP006294.1-201ENST00000415407 339 ntBASIC17.88■□□□□ 0.45
TRIM50Q86XT4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 U91328.1-201ENST00000437528 223 ntBASIC17.88■□□□□ 0.45
TRIM50Q86XT4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 AC132938.2-201ENST00000579188 680 ntBASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 AL591163.1-201ENST00000641757 987 ntBASIC17.88■□□□□ 0.45
TRIM50Q86XT4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 AC098614.1-201ENST00000368528 745 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 AC004987.2-201ENST00000395959 1148 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 MYCLP2-201ENST00000449268 967 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 RN7SL752P-201ENST00000463779 287 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ELK1P1-201ENST00000485699 580 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 AC123567.1-201ENST00000548294 1261 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 CTBP2P3-201ENST00000585629 1255 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 KRT8P37-201ENST00000451609 1420 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 AC008894.3-201ENST00000624324 3103 ntBASIC17.87■□□□□ 0.45
TRIM50Q86XT4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM50Q86XT4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 NKILA-202ENST00000614771 2598 ntBASIC17.86■□□□□ 0.45
TRIM50Q86XT4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AC134407.2-201ENST00000625089 1978 ntBASIC17.86■□□□□ 0.45
TRIM50Q86XT4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms