Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD3Q7Z3D4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 CNN2P2-201ENST00000443536 909 ntBASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 CNN2P3-201ENST00000450201 906 ntBASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AC105021.1-202ENST00000570572 669 ntBASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AC007967.4-201ENST00000614700 386 ntBASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AL136317.3-201ENST00000618497 906 ntBASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 AC024909.3-201ENST00000611513 2257 ntBASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD3Q7Z3D4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 AL136982.4-201ENST00000437689 1740 ntBASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 CYMP-203ENST00000474680 1263 ntBASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 AC106028.4-201ENST00000614509 607 ntBASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 PAUPAR-201ENST00000630360 2965 ntBASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms