Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MYO15B-237ENST00000642007 4893 ntBASIC16.48■□□□□ 0.23
CASC4Q6P4E1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 AC092474.2-201ENST00000424288 719 ntBASIC16.48■□□□□ 0.23
CASC4Q6P4E1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 AC007967.2-201ENST00000432613 625 ntBASIC16.48■□□□□ 0.23
CASC4Q6P4E1 AC140658.5-201ENST00000438532 169 ntBASIC16.48■□□□□ 0.23
CASC4Q6P4E1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 AC064836.3-201ENST00000607928 673 ntBASIC16.48■□□□□ 0.23
CASC4Q6P4E1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.48■□□□□ 0.23
CASC4Q6P4E1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASC4Q6P4E1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AC097376.2-205ENST00000610159 5334 ntBASIC16.47■□□□□ 0.23
CASC4Q6P4E1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASC4Q6P4E1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 HAUS4P1-201ENST00000406739 1145 ntBASIC16.46■□□□□ 0.23
CASC4Q6P4E1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 KRT19P2-202ENST00000557173 1012 ntBASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms