Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 AL021578.1-201ENST00000613646 709 ntBASIC19.93■□□□□ 0.78
RC3H1Q5TC82 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RC3H1Q5TC82 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 AC015818.8-201ENST00000587907 1519 ntBASIC19.92■□□□□ 0.78
RC3H1Q5TC82 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 AL138799.1-201ENST00000448213 1675 ntBASIC19.92■□□□□ 0.78
RC3H1Q5TC82 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 SCARNA20.5-201ENST00000516991 142 ntBASIC19.92■□□□□ 0.78
RC3H1Q5TC82 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 MIR4741-201ENST00000579822 90 ntBASIC19.92■□□□□ 0.78
RC3H1Q5TC82 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 KRT8P35-201ENST00000483942 1338 ntBASIC19.92■□□□□ 0.78
RC3H1Q5TC82 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RC3H1Q5TC82 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 MIR1202-201ENST00000408529 83 ntBASIC19.91■□□□□ 0.78
RC3H1Q5TC82 MTX1P1-201ENST00000440904 838 ntBASIC19.91■□□□□ 0.78
RC3H1Q5TC82 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 AC104982.3-201ENST00000581995 514 ntBASIC19.91■□□□□ 0.78
RC3H1Q5TC82 EEF1DP1-201ENST00000585891 896 ntBASIC19.91■□□□□ 0.78
RC3H1Q5TC82 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RC3H1Q5TC82 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.9■□□□□ 0.78
RC3H1Q5TC82 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms