Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.7■□□□□ 0.58
CERKLQ49MI3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
CERKLQ49MI3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.7■□□□□ 0.58
CERKLQ49MI3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CERKLQ49MI3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CERKLQ49MI3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CERKLQ49MI3 NKILA-202ENST00000614771 2598 ntBASIC18.7■□□□□ 0.58
CERKLQ49MI3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CERKLQ49MI3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 KRT18P64-201ENST00000434946 1219 ntBASIC18.69■□□□□ 0.58
CERKLQ49MI3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CERKLQ49MI3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
CERKLQ49MI3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.68■□□□□ 0.58
CERKLQ49MI3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CERKLQ49MI3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CERKLQ49MI3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 AC079776.1-201ENST00000401540 1152 ntBASIC18.67■□□□□ 0.58
CERKLQ49MI3 TOMM22P5-201ENST00000416399 439 ntBASIC18.67■□□□□ 0.58
CERKLQ49MI3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CERKLQ49MI3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.67■□□□□ 0.58
CERKLQ49MI3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.67■□□□□ 0.58
CERKLQ49MI3 AC007389.4-201ENST00000454674 793 ntBASIC18.67■□□□□ 0.58
CERKLQ49MI3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms