Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 GK-202ENST00000378941 458 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AC244107.1-201ENST00000442033 332 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 DOC2GP-202ENST00000514950 1163 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AC092337.1-201ENST00000568699 1129 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 SRD5A3P1-201ENST00000603021 949 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AL391825.1-201ENST00000457671 1364 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 SPDYE19P-201ENST00000338590 713 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AC025048.3-201ENST00000590609 569 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 CHCHD2P3-201ENST00000603038 451 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AC097359.3-201ENST00000603982 1210 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AC005702.4-201ENST00000618393 416 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AC004461.2-201ENST00000629517 803 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 AL109936.8-201ENST00000641772 604 ntBASIC19.28■□□□□ 0.68
RFX7Q2KHR2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFX7Q2KHR2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 DGCR5-201ENST00000399539 862 ntBASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 AC055876.2-201ENST00000531834 546 ntBASIC19.27■□□□□ 0.68
RFX7Q2KHR2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 AC099568.2-201ENST00000609194 695 ntBASIC19.27■□□□□ 0.68
RFX7Q2KHR2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX7Q2KHR2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFX7Q2KHR2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RFX7Q2KHR2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFX7Q2KHR2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFX7Q2KHR2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms