Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
IRX4P78413 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX4P78413 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX4P78413 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
IRX4P78413 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX4P78413 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
IRX4P78413 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX4P78413 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
IRX4P78413 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
IRX4P78413 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
IRX4P78413 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.83■□□□□ 0.28
IRX4P78413 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX4P78413 AL512638.1-201ENST00000457493 794 ntBASIC16.83■□□□□ 0.28
IRX4P78413 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
IRX4P78413 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.83■□□□□ 0.28
IRX4P78413 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.83■□□□□ 0.28
IRX4P78413 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.83■□□□□ 0.28
IRX4P78413 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX4P78413 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.83■□□□□ 0.28
IRX4P78413 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX4P78413 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX4P78413 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX4P78413 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX4P78413 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 AC067930.6-201ENST00000623257 4947 ntBASIC16.82■□□□□ 0.28
IRX4P78413 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX4P78413 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX4P78413 SPCS2P4-201ENST00000436160 681 ntBASIC16.82■□□□□ 0.28
IRX4P78413 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.82■□□□□ 0.28
IRX4P78413 AP005018.1-201ENST00000525475 301 ntBASIC16.82■□□□□ 0.28
IRX4P78413 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX4P78413 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX4P78413 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.82■□□□□ 0.28
IRX4P78413 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX4P78413 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.82■□□□□ 0.28
IRX4P78413 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX4P78413 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.82■□□□□ 0.28
IRX4P78413 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
IRX4P78413 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.81■□□□□ 0.28
IRX4P78413 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.81■□□□□ 0.28
IRX4P78413 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.81■□□□□ 0.28
IRX4P78413 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 AP002414.2-201ENST00000591780 3365 ntBASIC16.81■□□□□ 0.28
IRX4P78413 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms