Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SEC61A1P61619 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.17□□□□□ -0.14
SEC61A1P61619 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.17□□□□□ -0.14
SEC61A1P61619 DNAJB3-201ENST00000446806 729 ntBASIC14.17□□□□□ -0.14
SEC61A1P61619 ALG1L5P-201ENST00000482043 771 ntBASIC14.17□□□□□ -0.14
SEC61A1P61619 CXCL1P1-201ENST00000502804 216 ntBASIC14.17□□□□□ -0.14
SEC61A1P61619 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.17□□□□□ -0.14
SEC61A1P61619 AC096734.2-201ENST00000562054 433 ntBASIC14.17□□□□□ -0.14
SEC61A1P61619 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.17□□□□□ -0.14
SEC61A1P61619 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SEC61A1P61619 SNX18-202ENST00000343017 3140 ntBASIC14.17□□□□□ -0.14
SEC61A1P61619 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SEC61A1P61619 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SEC61A1P61619 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61A1P61619 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 AC025580.3-201ENST00000617932 1424 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 RHOQP3-201ENST00000437982 621 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 KRT19P2-202ENST00000557173 1012 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 MTDHP5-201ENST00000598980 586 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 ACTL9-202ENST00000612068 1252 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 AC023157.3-201ENST00000619086 2088 ntBASIC14.16□□□□□ -0.14
SEC61A1P61619 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SEC61A1P61619 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61A1P61619 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SEC61A1P61619 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms