Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN2P57739 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN2P57739 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CLDN2P57739 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLDN2P57739 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 ELK1P1-201ENST00000485699 580 ntBASIC15.82■□□□□ 0.12
CLDN2P57739 GIMAP3P-201ENST00000495150 836 ntBASIC15.82■□□□□ 0.12
CLDN2P57739 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN2P57739 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLDN2P57739 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN2P57739 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN2P57739 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN2P57739 AC134407.2-201ENST00000625089 1978 ntBASIC15.82■□□□□ 0.12
CLDN2P57739 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN2P57739 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN2P57739 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 AL512384.1-201ENST00000406683 331 ntBASIC15.81■□□□□ 0.12
CLDN2P57739 U91328.1-201ENST00000437528 223 ntBASIC15.81■□□□□ 0.12
CLDN2P57739 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
CLDN2P57739 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN2P57739 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN2P57739 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN2P57739 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN2P57739 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 AL008721.1-201ENST00000609964 604 ntBASIC15.81■□□□□ 0.12
CLDN2P57739 MIR8072-201ENST00000614241 80 ntBASIC15.81■□□□□ 0.12
CLDN2P57739 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN2P57739 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN2P57739 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 Z97205.2-201ENST00000564697 1639 ntBASIC15.8■□□□□ 0.12
CLDN2P57739 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.8■□□□□ 0.12
CLDN2P57739 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms