Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.98■□□□□ 0.95
RIPK4P57078 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.98■□□□□ 0.95
RIPK4P57078 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.98■□□□□ 0.95
RIPK4P57078 AC025048.3-201ENST00000590609 569 ntBASIC20.98■□□□□ 0.95
RIPK4P57078 LINC02560-201ENST00000596379 459 ntBASIC20.98■□□□□ 0.95
RIPK4P57078 AC005702.4-201ENST00000618393 416 ntBASIC20.98■□□□□ 0.95
RIPK4P57078 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK4P57078 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.98■□□□□ 0.95
RIPK4P57078 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.98■□□□□ 0.95
RIPK4P57078 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK4P57078 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
RIPK4P57078 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK4P57078 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 AC026691.1-201ENST00000602502 2017 ntBASIC20.97■□□□□ 0.95
RIPK4P57078 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 PHKG1P2-201ENST00000457537 863 ntBASIC20.97■□□□□ 0.95
RIPK4P57078 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 SERBP1P5-201ENST00000510079 1181 ntBASIC20.97■□□□□ 0.95
RIPK4P57078 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 SDHAP3-202ENST00000515467 728 ntBASIC20.97■□□□□ 0.95
RIPK4P57078 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.97■□□□□ 0.95
RIPK4P57078 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.97■□□□□ 0.95
RIPK4P57078 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.97■□□□□ 0.95
RIPK4P57078 AC011477.6-201ENST00000604980 1927 ntBASIC20.97■□□□□ 0.95
RIPK4P57078 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RIPK4P57078 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RIPK4P57078 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK4P57078 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.97■□□□□ 0.95
RIPK4P57078 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.96■□□□□ 0.95
RIPK4P57078 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 AL513523.2-202ENST00000427283 2040 ntBASIC20.96■□□□□ 0.95
RIPK4P57078 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.96■□□□□ 0.95
RIPK4P57078 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.96■□□□□ 0.95
RIPK4P57078 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.96■□□□□ 0.95
RIPK4P57078 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.96■□□□□ 0.95
RIPK4P57078 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 AC135586.1-201ENST00000539323 574 ntBASIC20.96■□□□□ 0.95
RIPK4P57078 MIR3197-201ENST00000582241 73 ntBASIC20.96■□□□□ 0.95
RIPK4P57078 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.96■□□□□ 0.95
RIPK4P57078 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RIPK4P57078 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RIPK4P57078 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
RIPK4P57078 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 PCDHA1-201ENST00000378133 2726 ntBASIC20.96■□□□□ 0.95
RIPK4P57078 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK4P57078 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK4P57078 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RIPK4P57078 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.95■□□□□ 0.94
RIPK4P57078 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RIPK4P57078 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.95■□□□□ 0.94
RIPK4P57078 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK4P57078 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RIPK4P57078 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RIPK4P57078 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms