Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.03□□□□□ -0.16
ATP1B3P54709 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 RNA5SP415-201ENST00000517246 115 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 AL662844.1-201ENST00000546340 181 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 AC096734.2-201ENST00000562054 433 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.03□□□□□ -0.16
ATP1B3P54709 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ATP1B3P54709 AC104692.2-201ENST00000603054 253 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.03□□□□□ -0.16
ATP1B3P54709 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.03□□□□□ -0.16
ATP1B3P54709 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 CDC14C-201ENST00000428251 1719 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 LINC02447-202ENST00000501888 2146 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATP1B3P54709 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.03□□□□□ -0.16
ATP1B3P54709 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ATP1B3P54709 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ATP1B3P54709 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.02□□□□□ -0.16
ATP1B3P54709 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.02□□□□□ -0.16
ATP1B3P54709 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.02□□□□□ -0.16
ATP1B3P54709 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.02□□□□□ -0.16
ATP1B3P54709 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.02□□□□□ -0.16
ATP1B3P54709 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATP1B3P54709 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.02□□□□□ -0.16
ATP1B3P54709 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.02□□□□□ -0.16
ATP1B3P54709 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ATP1B3P54709 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ATP1B3P54709 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.02□□□□□ -0.17
ATP1B3P54709 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.02□□□□□ -0.17
ATP1B3P54709 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.02□□□□□ -0.17
ATP1B3P54709 HCG4B-203ENST00000450128 991 ntBASIC14.02□□□□□ -0.17
ATP1B3P54709 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.02□□□□□ -0.17
ATP1B3P54709 KRT18P34-201ENST00000488218 1270 ntBASIC14.02□□□□□ -0.17
ATP1B3P54709 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.02□□□□□ -0.17
ATP1B3P54709 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
ATP1B3P54709 AC023141.13-201ENST00000604991 943 ntBASIC14.02□□□□□ -0.17
ATP1B3P54709 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ATP1B3P54709 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.02□□□□□ -0.17
ATP1B3P54709 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ATP1B3P54709 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATP1B3P54709 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.02□□□□□ -0.17
ATP1B3P54709 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.01□□□□□ -0.17
ATP1B3P54709 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
ATP1B3P54709 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATP1B3P54709 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATP1B3P54709 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.01□□□□□ -0.17
ATP1B3P54709 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ATP1B3P54709 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATP1B3P54709 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ATP1B3P54709 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.01□□□□□ -0.17
ATP1B3P54709 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATP1B3P54709 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms