Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 LETM1P2-201ENST00000597330 2178 ntBASIC17.63■□□□□ 0.41
BRCA2P51587 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.63■□□□□ 0.41
BRCA2P51587 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.63■□□□□ 0.41
BRCA2P51587 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCA2P51587 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCA2P51587 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.62■□□□□ 0.41
BRCA2P51587 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BRCA2P51587 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 AC022217.1-201ENST00000521069 738 ntBASIC17.62■□□□□ 0.41
BRCA2P51587 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.62■□□□□ 0.41
BRCA2P51587 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BRCA2P51587 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.62■□□□□ 0.41
BRCA2P51587 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCA2P51587 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BRCA2P51587 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.62■□□□□ 0.41
BRCA2P51587 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCA2P51587 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BRCA2P51587 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 COX5BP1-201ENST00000507622 393 ntBASIC17.61■□□□□ 0.41
BRCA2P51587 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.61■□□□□ 0.41
BRCA2P51587 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.61■□□□□ 0.41
BRCA2P51587 AC145423.3-201ENST00000615987 467 ntBASIC17.61■□□□□ 0.41
BRCA2P51587 AC011491.1-203ENST00000637688 543 ntBASIC17.61■□□□□ 0.41
BRCA2P51587 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
BRCA2P51587 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 CD8B2-202ENST00000417670 633 ntBASIC17.61■□□□□ 0.41
BRCA2P51587 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BRCA2P51587 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.61■□□□□ 0.41
BRCA2P51587 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BRCA2P51587 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCA2P51587 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.61■□□□□ 0.41
BRCA2P51587 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.61■□□□□ 0.41
BRCA2P51587 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCA2P51587 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCA2P51587 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCA2P51587 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.6■□□□□ 0.41
BRCA2P51587 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.6■□□□□ 0.41
BRCA2P51587 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.6■□□□□ 0.41
BRCA2P51587 AC124947.2-201ENST00000547118 1133 ntBASIC17.6■□□□□ 0.41
BRCA2P51587 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.6■□□□□ 0.41
BRCA2P51587 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
BRCA2P51587 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
BRCA2P51587 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCA2P51587 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.6■□□□□ 0.41
BRCA2P51587 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms