Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
PDE6CP51160 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDE6CP51160 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.43■□□□□ 0.38
PDE6CP51160 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6CP51160 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 SPCS2P4-201ENST00000436160 681 ntBASIC17.43■□□□□ 0.38
PDE6CP51160 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.43■□□□□ 0.38
PDE6CP51160 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 AL512356.2-201ENST00000546955 174 ntBASIC17.43■□□□□ 0.38
PDE6CP51160 AC093520.2-201ENST00000561830 333 ntBASIC17.43■□□□□ 0.38
PDE6CP51160 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.43■□□□□ 0.38
PDE6CP51160 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6CP51160 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 AL365330.1-201ENST00000607459 531 ntBASIC17.43■□□□□ 0.38
PDE6CP51160 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 AC008267.7-201ENST00000624570 1194 ntBASIC17.43■□□□□ 0.38
PDE6CP51160 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.43■□□□□ 0.38
PDE6CP51160 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PDE6CP51160 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6CP51160 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 AC068418.2-201ENST00000577309 3703 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 AC069224.1-201ENST00000566372 1715 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PDE6CP51160 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.42■□□□□ 0.38
PDE6CP51160 AC109322.1-201ENST00000524499 1264 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 AC011467.4-201ENST00000594891 528 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 AP001059.3-201ENST00000619053 235 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 AC084121.4-201ENST00000641598 221 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 AF228730.8-201ENST00000642140 221 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6CP51160 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.42■□□□□ 0.38
PDE6CP51160 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.42■□□□□ 0.38
PDE6CP51160 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 UXT-AS1-201ENST00000590504 1525 ntBASIC17.42■□□□□ 0.38
PDE6CP51160 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PDE6CP51160 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6CP51160 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PDE6CP51160 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6CP51160 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6CP51160 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PDE6CP51160 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDE6CP51160 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PDE6CP51160 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDE6CP51160 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 MIR770-201ENST00000390219 98 ntBASIC17.41■□□□□ 0.38
PDE6CP51160 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.41■□□□□ 0.38
PDE6CP51160 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6CP51160 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6CP51160 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6CP51160 PAUPAR-201ENST00000630360 2965 ntBASIC17.41■□□□□ 0.38
PDE6CP51160 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms